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  5. Aob_g13899

Aob_g13899


Description : component *(eL30) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g13899
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT3G18740 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 OrthoFinder output from all 47 species
Adi_g019990 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g33421 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g17201 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g69765 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001164.6 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre10.g420750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g06686 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01022191001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01032102001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_02409 No alias component RPL30 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os01g16890.1 LOC_Os01g16890 component RPL30 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Lfl_g19015 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_6354g0010 No alias component RPL30 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp7g01690.1 No alias component RPL30 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g39132 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_10400V3.1 Pp3c16_10400 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Pp3c4_15480V3.1 Pp3c4_15480 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 OrthoFinder output from all 47 species
Ppi_g33788 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g11494 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g41445 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41910 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g42031 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo19071 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc04g072660.4.1 Solyc04g072660 component RPL30 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc11g071490.2.1 Solyc11g071490 component RPL30 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Tin_g05827 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 12 104
No external refs found!