1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g14625

Aob_g14625


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g14625
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00115350 RARE1,... Pentatricopeptide repeat-containing protein At5g13270,... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Aev_g06982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34817 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20490 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15602 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07015 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06316.t1 Aspi01Gene06316 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07593.t1 ATFTSZ2-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52005.t1 Aspi01Gene52005 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54997.t1 CRK8, Aspi01Gene54997 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0119.g046740 No alias not classified & original description: CDS=1-2259 0.04 OrthoFinder output from all 47 species
Cba_g04042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05254 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06497 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20826 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36071 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.15G008800.1 Ceric.15G008800 not classified & original description: pacid=50639552... 0.04 OrthoFinder output from all 47 species
Ceric.18G077100.1 Ceric.18G077100 not classified & original description: pacid=50621411... 0.04 OrthoFinder output from all 47 species
Ceric.1Z005100.1 Ceric.1Z005100 not classified & original description: pacid=50567700... 0.03 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.04 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Dac_g12450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04315 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04371 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20970 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28824 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.02 OrthoFinder output from all 47 species
Len_g00723 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06198 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07034 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07835 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11306 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g37815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_153011g0010 MEF1 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Msp_g03905 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06656 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43377 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05129 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37271 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12406 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14311 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g16784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43620 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23429 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g28658 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53969 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015944 CRR22 not classified & original description: CDS=122-4345 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021049 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2289 0.03 OrthoFinder output from all 47 species
Sam_g06616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 141
IPR002885 Pentatricopeptide_repeat 552 577
IPR002885 Pentatricopeptide_repeat 274 322
IPR002885 Pentatricopeptide_repeat 476 520
IPR002885 Pentatricopeptide_repeat 173 221
IPR002885 Pentatricopeptide_repeat 376 423
No external refs found!