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  5. Aob_g15074

Aob_g15074


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15074
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G37950 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G18760 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G59000 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g31446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33633 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69359.t1 Aspi01Gene69359 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0096.g043766 No alias not classified & original description: CDS=488-1357 0.03 OrthoFinder output from all 47 species
Cba_g68167 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G009300.1 Ceric.15G009300 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g04869 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025179001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Lfl_g07919 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436661g0020 No alias RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_9139232g0010 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ore_g43716 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48723 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07939 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018968 No alias bHLH-type transcription factor & original description: CDS=1-675 0.04 OrthoFinder output from all 47 species
Zm00001e031805_P001 Zm00001e031805 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040499_P001 Zm00001e040499 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 256 303
No external refs found!