Aob_g16293

Description : component *(PsbW) of PS-II complex & original description: none

Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g16293
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
Ala_g04986	No alias	component *(PsbW) of PS-II complex & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g15176	No alias	component *(PsbW) of PS-II complex & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18523	PSBW	component *(PsbW) of PS-II complex & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g01886	PSBW	component *(PsbW) of PS-II complex & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g17355	PSBW	component *(PsbW) of PS-II complex & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g19670	PSBW	component *(PsbW) of PS-II complex & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g33298	No alias	component *(PsbW) of PS-II complex & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c18_6770V3.1	PSBW, Pp3c18_6770	photosystem II reaction center W	0.01	OrthoFinder output from all 47 species
Pp3c22_16330V3.1	PSBW, Pp3c22_16330	photosystem II reaction center W	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IEA	Interproscan
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006012	galactose metabolic process	IEP	HCCA
MF	GO:0008108	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0070569	uridylyltransferase activity	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009806	PSII_PsbW_class2	38	146

External Links

No external refs found!