Aliases : ATTIF3A1, ATEIF3A-1, EIF3A-1, TIF3A1, EIF3A
Description : component *(eIF3a) of eIF3 mRNA-to-PIC binding complex & original description: none
Gene families : OG0003482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003482_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g17064 | |
| Cluster | HCCA: Cluster_153 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00041460 | ATTIF3A1,... | Protein biosynthesis.translation... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G11420 | ATTIF3A1,... | eukaryotic translation initiation factor 3A | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005236 | ATTIF3A1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g019096 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058173 | ATTIF3A1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g02586 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10292.t1 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01309 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G086600.1 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20870 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12728 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g05941 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09878 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12129 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031192001 | ATTIF3A1,... | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38241 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| MA_5693g0010 | ATTIF3A1,... | component eIF3a of eIF3 mRNA-to-PIC binding complex | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g21099 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25531 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02307 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07445 | ATTIF3A1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14105 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003574 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g010460.3.1 | ATTIF3A1,... | component eIF3a of eIF3 mRNA-to-PIC binding complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08762 | ATTIF3A1,... | component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016603_P001 | ATTIF3A1,... | component eIF3a of eIF3 mRNA-to-PIC binding complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006897 | endocytosis | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000717 | PCI_dom | 372 | 508 |
| No external refs found! |
