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  5. Aob_g17432

Aob_g17432


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17432

Target Alias Description ECC score Gene Family Method Actions
AT2G36710 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g046688 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16111 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20368 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0648.g080900 No alias pectin methylesterase & original description: CDS=62-1303 0.03 OrthoFinder output from all 47 species
Azfi_s1046.g096024 No alias not classified & original description: CDS=62-952 0.03 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G069000.1 Ceric.10G069000 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.11G007100.1 Ceric.11G007100 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007800.1 Ceric.11G007800 not classified & original description: pacid=50595757... 0.05 OrthoFinder output from all 47 species
Ceric.11G007900.1 Ceric.11G007900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037300.1 Ceric.13G037300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G007600.1 Ceric.14G007600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z171200.1 Ceric.1Z171200 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z239300.1 Ceric.1Z239300 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G046900.1 Ceric.35G046900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03343 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05158 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08073 QRT1 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09632 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12392 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12470 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12472 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13223 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13224 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14386 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g37045 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39582 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25737 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_19430V3.1 Pp3c16_19430 Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
Spa_g07165 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40449 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09242 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14064 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 88 372
No external refs found!