1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g17486

Aob_g17486


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17486
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AT3G08790 No alias ENTH/VHS/GAT family protein 0.03 OrthoFinder output from all 47 species
AT5G16880 No alias Target of Myb protein 1 0.02 OrthoFinder output from all 47 species
Ala_g32447 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36646 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01820 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53703.t1 Aspi01Gene53703 ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10574 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028344001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
LOC_Os05g39760.1 LOC_Os05g39760 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
LOC_Os10g42724.1 LOC_Os10g42724 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Len_g08083 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g01385 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39498 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g05840.1 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Nbi_g05386 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05247 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07313 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29590 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Solyc08g068370.3.1 Solyc08g068370 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e031902_P001 Zm00001e031902 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR004152 GAT_dom 194 268
IPR002014 VHS_dom 3 112
No external refs found!