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  5. Aob_g17691

Aob_g17691


Description : regulatory protein *(SUO) of miRNA biogenesis pathway & original description: none


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17691

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00141920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.05 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 OrthoFinder output from all 47 species
Adi_g097046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46582 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aev_g47750 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.07 OrthoFinder output from all 47 species
Ala_g37018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13012.t1 Aspi01Gene13012 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33702.t1 Aspi01Gene33702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40551.t1 Aspi01Gene40551 regulatory protein *(SUO) of miRNA bioGenesis pathway &... 0.04 OrthoFinder output from all 47 species
Azfi_s0100.g044240 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Cba_g07774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62788 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ceric.02G029300.1 Ceric.02G029300 not classified & original description: pacid=50584188... 0.03 OrthoFinder output from all 47 species
Ceric.04G080100.1 Ceric.04G080100 not classified & original description: pacid=50631023... 0.03 OrthoFinder output from all 47 species
Ceric.11G079200.1 Ceric.11G079200 not classified & original description: pacid=50595155... 0.04 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.08 OrthoFinder output from all 47 species
Cre06.g292650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g15540 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g09005 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ehy_g00900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15177 No alias PSY precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01009936001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_05084 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05690 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50840.2 LOC_Os02g50840 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g50850.2 LOC_Os02g50850 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g42490.1 LOC_Os06g42490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g11979 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
MA_10428034g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_24475g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_33300g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_710118g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g15600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pnu_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005145 No alias not classified & original description: CDS=1-3426 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018052 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Sam_g04139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Sam_g36177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo440870 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g089320.3.1 Solyc12g089320 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g09113 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Tin_g13966 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Tin_g13967 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Tin_g21836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 43 150
IPR017923 TFIIS_N 358 407
No external refs found!