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  5. Lfl_g22800

Lfl_g22800


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22800

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00134690 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G67856 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G10160 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17245 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g36854 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14350.t1 Aspi01Gene14350 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16504.t1 Aspi01Gene16504 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16526.t1 XERICO, Aspi01Gene16526 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46290.t1 Aspi01Gene46290 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043306 No alias not classified & original description: CDS=1-900 0.03 OrthoFinder output from all 47 species
Azfi_s0098.g043930 No alias not classified & original description: CDS=29-547 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044133 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g05155 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.27 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Cre01.g009101 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g05542 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dac_g14773 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g44213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00468 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g02434 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g15100.1 ATL2, TL2, LOC_Os02g15100 RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40460.1 LOC_Os12g40460 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g10964 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g31335 ATRING1, RING1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7553g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g15250.1 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ore_g28091 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g32953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g39132 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01184 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Smo405202 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo96631 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Zm00001e017959_P001 Zm00001e017959 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 118 161
No external refs found!