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  5. Aob_g17904

Aob_g17904 (SHR, SGR7)


Aliases : SHR, SGR7

Description : gravity signalling transcription factor *(SHR) & original description: none


Gene families : OG0003562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003562_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00182770 SHR, SGR7,... External stimuli response.gravity.sensing and... 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00066190 SHR, SGR7,... External stimuli response.gravity.sensing and... 0.02 OrthoFinder output from all 47 species
AT4G37650 SHR, SGR7 GRAS family transcription factor 0.04 OrthoFinder output from all 47 species
Adi_g082025 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.04 OrthoFinder output from all 47 species
Aev_g06030 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Aev_g10209 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15940.t1 SHR, SGR7,... gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17700.t1 SHR, SGR7,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17704.t1 SHR, SGR7,... gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Cba_g08221 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Cba_g08230 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Dac_g13396 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Dcu_g31513 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01000107001 SHR, SGR7 External stimuli response.gravity.sensing and... 0.02 OrthoFinder output from all 47 species
LOC_Os03g31880.1 SHR, SGR7, LOC_Os03g31880 transcription factor (GRAS). SHR gravity signalling... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39820.1 SHR, SGR7, LOC_Os07g39820 transcription factor (GRAS). SHR gravity signalling... 0.03 OrthoFinder output from all 47 species
Len_g46830 SHR, SGR7 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27147 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Pir_g12887 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Solyc02g092370.1.1 SHR, SGR7, Solyc02g092370 transcription factor (GRAS). SHR gravity signalling... 0.06 OrthoFinder output from all 47 species
Solyc08g014030.1.1 SHR, SGR7, Solyc08g014030 transcription factor (GRAS). SHR gravity signalling... 0.05 OrthoFinder output from all 47 species
Zm00001e002085_P001 SHR, SGR7, Zm00001e002085 transcription factor (GRAS). SHR gravity signalling... 0.03 OrthoFinder output from all 47 species
Zm00001e035411_P001 SHR, SGR7, Zm00001e035411 transcription factor (GRAS). SHR gravity signalling... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 103 471
No external refs found!