Aob_g18493


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18493

Target Alias Description ECC score Gene Family Method Actions
AT5G13270 RARE1 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005234 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053729 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07268 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03473.t1 Aspi01Gene03473 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t2 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52145.t1 CRR22, Aspi01Gene52145 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015570 OTP86 not classified & original description: CDS=1-2442 0.03 OrthoFinder output from all 47 species
Cba_g04626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G019500.1 Ceric.04G019500 not classified & original description: pacid=50631611... 0.04 OrthoFinder output from all 47 species
Ceric.10G022300.1 Ceric.10G022300 not classified & original description: pacid=50612428... 0.04 OrthoFinder output from all 47 species
Ceric.26G043600.1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.36G017300.1 Ceric.36G017300 not classified & original description: pacid=50568624... 0.03 OrthoFinder output from all 47 species
Dcu_g06376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08260 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08804 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12573 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Len_g17726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23525 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_28980V3.1 Pp3c6_28980 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005911 EMB2758 not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10964 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 121
IPR002885 Pentatricopeptide_repeat 24 70
IPR002885 Pentatricopeptide_repeat 122 169
No external refs found!