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  5. Aob_g18876

Aob_g18876 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18876

Target Alias Description ECC score Gene Family Method Actions
AT1G47655 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
Adi_g016287 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074898 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20056 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01538 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11580 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04342 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51755 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09379 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13553.t1 CDF3, Aspi01Gene13553 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18959.t1 ADOF1, DOF1,... transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43236.t1 TMO6, Aspi01Gene43236 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0197.g057380 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=242-1003 0.03 OrthoFinder output from all 47 species
Cba_g24626 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25585 OBP4 transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g26303 TMO6 transcription factor *(DOF) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.30G042800.1 OBP3, Ceric.30G042800 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02618 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44800 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19391 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03345 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002242001 ADOF2, DOF2 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os02g15350.1 LOC_Os02g15350 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g38870.1 LOC_Os03g38870 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g29960.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os10g26620.1 CDF1, LOC_Os10g26620 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g10091 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28794 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
MA_46520g0010 No alias transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47967 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00946 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10327 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18788 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19752 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09266 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870 TMO6 transcription factor *(DOF) & original description: CDS=1-1464 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517 CDF3 transcription factor *(DOF) & original description: CDS=154-1659 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0279.g027089 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1056 0.04 OrthoFinder output from all 47 species
Smo29563 OBP4 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Solyc02g076850.2.1 Solyc02g076850 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc02g090220.3.1 OBP1, Solyc02g090220 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc04g079570.1.1 OBP1, Solyc04g079570 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc06g062520.1.1 ADOF1, DOF1,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Spa_g05594 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49511 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54524 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14068 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e005107_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e016572_P001 ADOF1, DOF1,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e023435_P001 OBP4, Zm00001e023435 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 43 97
No external refs found!