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  5. Aob_g19314

Aob_g19314


Description : not classified & original description: none


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g19314
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Aop_g15706 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g266383 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g18759 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.02 OrthoFinder output from all 47 species
Msp_g31698 No alias RNA helicase *(Prp22) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009161 No alias not classified & original description: CDS=1-1362 0.02 OrthoFinder output from all 47 species
Sam_g25079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 456 543
IPR011709 DEAD-box_helicase_OB_fold 603 682
IPR001650 Helicase_C 270 393
No external refs found!