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  5. Aob_g19340

Aob_g19340 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g19340

Target Alias Description ECC score Gene Family Method Actions
Adi_g011918 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058187 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g078542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097993 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03230 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35079.t1 Aspi01Gene35079 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G014700.1 EMB2758, Ceric.06G014700 not classified & original description: pacid=50619889... 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 529 576
IPR002885 Pentatricopeptide_repeat 229 274
IPR002885 Pentatricopeptide_repeat 429 475
IPR002885 Pentatricopeptide_repeat 329 374
IPR002885 Pentatricopeptide_repeat 303 328
IPR002885 Pentatricopeptide_repeat 604 626
IPR046848 E_motif 647 709
IPR033443 PPR_long 61 226
No external refs found!