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  5. Aob_g19869

Aob_g19869


Description : AHL clade-A transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g19869
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00022450 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 24... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00093420 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
AT2G35270 GIK Predicted AT-hook DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.04 OrthoFinder output from all 47 species
Aspi01Gene07381.t2 Aspi01Gene07381 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13410.t1 AHL22, Aspi01Gene13410 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30094.t1 Aspi01Gene30094 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0218.g058586 No alias AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g71906 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z164900.1 Ceric.1Z164900 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G027400.1 AHL22, Ceric.31G027400 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g36372 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g27973 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03451 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22290 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016497001 AHL15, AGF2 AT-hook motif nuclear-localized protein 15... 0.03 OrthoFinder output from all 47 species
GSVIVT01036210001 AHL20 AT-hook motif nuclear-localized protein 19... 0.03 OrthoFinder output from all 47 species
LOC_Os06g22100.2 AHL22, LOC_Os06g22100 AT-hook motif nuclear-localized protein 24... 0.02 OrthoFinder output from all 47 species
Len_g32642 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_291092g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.04 OrthoFinder output from all 47 species
MA_41289g0010 GIK AT-hook motif nuclear-localized protein 17... 0.04 OrthoFinder output from all 47 species
MA_97756g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
Ore_g35788 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26141 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30154 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g089620.1.1 AHL20, Solyc09g089620 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Spa_g38567 AHL20 AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e007105_P001 Zm00001e007105 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e023375_P001 AHL22, Zm00001e023375 AT-hook motif nuclear-localized protein 25... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 93 205
No external refs found!