Aob_g19927


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g19927

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217860 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g21660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49740.1 EMB2744, LOC_Os05g49740 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05809 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22409 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24442 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g32537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25239 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 101 143
IPR002885 Pentatricopeptide_repeat 1 41
IPR002885 Pentatricopeptide_repeat 69 95
No external refs found!