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  5. Aob_g20395

Aob_g20395


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g20395

Target Alias Description ECC score Gene Family Method Actions
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g11596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16028 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G002600.1 EMB2758, Ceric.02G002600 not classified & original description: pacid=50585462... 0.04 OrthoFinder output from all 47 species
Ceric.15G051800.1 VAC1, ECB2,... not classified & original description: pacid=50639747... 0.05 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.02 OrthoFinder output from all 47 species
Dac_g28445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g31739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38400 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16158 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14002 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30016 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06092 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e039305_P001 Zm00001e039305 RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR046848 E_motif 139 192
IPR002885 Pentatricopeptide_repeat 2 20
IPR002885 Pentatricopeptide_repeat 96 121
No external refs found!