Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aob_g20797 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G19810 | No alias | CCCH-type zinc finger family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G55980 | ATSZF1, SZF1 | salt-inducible zinc finger 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G29190 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G07500 | PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G44260 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008195 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g045996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075797 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081004 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10851 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19731 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g32930 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14185.t1 | Aspi01Gene14185 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene14509.t1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30050.t1 | Aspi01Gene30050 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene40185.t1 | Aspi01Gene40185 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene71552.t1 | Aspi01Gene71552 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037758 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03917 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05838 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G078500.1 | Ceric.04G078500 | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z168000.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g146267 | ATTZF1, ATCTH | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02872 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09656 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10045 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14003 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g21498 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03949 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24267 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04847 | SZF2, ATSZF2, ZFAR1, CZF1 | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025263001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g49170.1 | LOC_Os03g49170 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g10670.1 | LOC_Os05g10670 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09001 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18302 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21927 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| MA_11306g0010 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| MA_98656g0010 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g21417 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10512 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13365 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28683 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35856 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g05173 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g39344 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g43895 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g49541 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15715 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30312 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01109 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04592 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43622 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010425 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Smo441947 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Smo443970 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g087170.3.1 | Solyc01g087170 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41753 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016582_P001 | Zm00001e016582 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027454_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032199_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
