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  5. Aob_g21473

Aob_g21473 (AtGH9C3, GH9C3)


Aliases : AtGH9C3, GH9C3

Description : class-C endo-1,4-beta-glucanase & original description: none


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g21473
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00247670 GH9B18,... Endoglucanase 23 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.02 OrthoFinder output from all 47 species
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.03 OrthoFinder output from all 47 species
AT4G23560 GH9B15, AtGH9B15 glycosyl hydrolase 9B15 0.02 OrthoFinder output from all 47 species
Adi_g081294 AtGH9B7, GH9B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69646.t1 AtGH9A4, GH9A4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G049400.1 GH9C2, AtGH9C2,... class-C endo-1,4-beta-glucanase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_40488 ATCEL2, CEL2 Endoglucanase 1 OS=Persea americana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g12070.1 GH9C2, AtGH9C2,... Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os02g05744.1 AtGH9B8, GH9B8,... Endoglucanase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13830.1 AtGH9B8, GH9B8,... Endoglucanase 16 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os09g23084.1 AtGH9B8, GH9B8,... Endoglucanase 22 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_128094g0010 ATCEL2, CEL2 Endoglucanase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_140507g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_182379g0010 AtGH9B6, GH9B6 Endoglucanase 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_195523g0020 AtGH9A4, GH9A4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g03630.1 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g03880.1 GH9B14, AtGH9B14 Endoglucanase OS=Phaseolus vulgaris (sp|p22503|gun_phavu : 521.0) 0.03 OrthoFinder output from all 47 species
Pnu_g24613 AtGH9B7, GH9B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01159 AtGH9B5, GH9B5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62195 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63529 GH9C2, AtGH9C2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027084 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g10198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083980.3.1 AtGH9B5, GH9B5,... Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc11g040340.3.1 CEL5, ATGH9B4,... endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
Tin_g11927 AtGH9B13, GH9B13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013675_P001 AtGH9B8, GH9B8,... Endoglucanase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036035_P001 AtGH9B8, GH9B8,... Endoglucanase 16 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 25 484
IPR019028 CBM_49 516 592
No external refs found!