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  5. Aob_g22222

Aob_g22222


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00185480 ERF-1, ATERF-1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61600 ERF104 ethylene response factor 104 0.03 OrthoFinder output from all 47 species
Ala_g01005 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g00529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g09855 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aob_g29351 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03221.t1 DEAR3, Aspi01Gene03221 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05372.t1 DEAR3, Aspi01Gene05372 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07603.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53917.t1 Aspi01Gene53917 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene60678.t1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70904.t1 Aspi01Gene70904 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031184 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1062 0.02 OrthoFinder output from all 47 species
Cba_g07845 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.13G053900.1 Ceric.13G053900 subgroup ERF-IX transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.01 OrthoFinder output from all 47 species
Dcu_g01289 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03884 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05969 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20228 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23206 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033416001 RAP2.11 External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g07511 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02762 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10426586g0010 ERF7, ATERF7, ATERF-7 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_135279g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp7g13760.1 RAP2.4 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g25476 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30591 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g10934 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g23421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17467 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32187 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32668 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011388 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g066660.1.1 TINY2, Solyc08g066660 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc12g008350.3.1 TINY2, Solyc12g008350 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Spa_g04539 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g39435 Rap2.6L not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24052 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e029765_P001 Zm00001e029765 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e033537_P001 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e041815_P001 Zm00001e041815 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 239 283
No external refs found!