Aob_g22235


Description : not classified & original description: none


Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22235

Target Alias Description ECC score Gene Family Method Actions
AT5G19310 No alias Homeotic gene regulator 0.03 OrthoFinder output from all 47 species
Adi_g093200 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g03411 PKL, GYM, CHR6,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.02 OrthoFinder output from all 47 species
Aob_g29989 PKR1, CHR4 CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021623.13 PKL, GYM, CHR6,... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Cre12.g508150 CHR11 Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder output from all 47 species
Dac_g06996 CHR11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19433 ATCHR12 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g15030.1 CHR17 chromatin remodeling factor (Iswi) 0.02 OrthoFinder output from all 47 species
Spa_g46637 PKL, GYM, CHR6,... not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 411 534
IPR000330 SNF2_N 67 387
No external refs found!