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  5. Aob_g22275

Aob_g22275


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22275

Target Alias Description ECC score Gene Family Method Actions
AT4G27280 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Aev_g05269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g42174 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16361.t1 PBP1, Aspi01Gene16361 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11470 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10168324g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10375806g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_1999194g0010 No alias Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_2285714g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_48747g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_6606267g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_8085699g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g36268 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g006660.3.1 Solyc10g006660 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g006700.1.1 Solyc10g006700 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013045_P001 Zm00001e013045 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 45 94
No external refs found!