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  5. Aob_g22709

Aob_g22709


Description : not classified & original description: none


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22709

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00196010 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00037160 ZAR1,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.03 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Aob_g30550 ZAR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
Gb_10845 LOV1 Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.06 OrthoFinder output from all 47 species
Gb_35026 ZAR1 Disease resistance protein RPP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g21890.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12300.1 LOC_Os11g12300 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g37770.1 LOC_Os12g37770 no description available(sp|f7j0n2|rga5r_orysj : 437.0) 0.04 OrthoFinder output from all 47 species
Pir_g31525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g084890.3.1 ZAR1, Solyc02g084890 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.04 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g025820.1.1 RPP13, Solyc04g025820 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g039420.1.1 RPP13, Solyc07g039420 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g008220.4.1 Solyc10g008220 Putative late blight resistance protein homolog R1A-6... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 1 226
No external refs found!