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  5. Aob_g23493

Aob_g23493


Description : regulatory protein *(CMU) of microtubule-dependent CSC insertion & original description: none


Gene families : OG0000703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g23493
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT4G10840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g04844 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Aev_g37891 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Ala_g14285 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Als_g07255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14298 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Aspi01Gene01505.t1 Aspi01Gene01505 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09569.t1 Aspi01Gene09569 regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10907.t1 Aspi01Gene10907 regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Dac_g03822 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Dac_g05126 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Dac_g17797 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Dcu_g01862 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Dcu_g16675 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
GSVIVT01027175001 No alias Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032474001 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_24147 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.06 OrthoFinder output from all 47 species
LOC_Os02g01960.1 LOC_Os02g01960 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.03 OrthoFinder output from all 47 species
LOC_Os02g47880.1 LOC_Os02g47880 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.07 OrthoFinder output from all 47 species
Len_g20870 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
MA_10430767g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_50635g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_760658g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.06 OrthoFinder output from all 47 species
MA_760658g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g01430 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Nbi_g04429 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Pir_g10852 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015505 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Sam_g19488 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Solyc08g008460.2.1 Solyc08g008460 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
Spa_g04349 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.04 OrthoFinder output from all 47 species
Zm00001e013426_P003 Zm00001e013426 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
Zm00001e023340_P002 Zm00001e023340 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.06 OrthoFinder output from all 47 species
Zm00001e025391_P001 Zm00001e025391 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 684 708
No external refs found!