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  5. Lfl_g23375

Lfl_g23375


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g23375
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT4G40040 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g014652 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014654 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30174 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34133 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13166 No alias histone H3 variant *(CENH3) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g36382 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01978.t1 Aspi01Gene01978 histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G024400.1 Ceric.27G024400 histone *(H3) & original description: pacid=50605092... 0.02 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.01 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.01 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre16.g649900 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Dac_g07276 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11158 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01832 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os03g27310.2 LOC_Os03g27310 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.03 OrthoFinder output from all 47 species
Lfl_g02591 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
MA_197719g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_24261g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_259842g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Msp_g38566 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g41472 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01405 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c20_8550V3.1 Pp3c20_8550 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g60005 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Smo171192 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.02 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014760_P001 Zm00001e014760 histone (H3) 0.04 OrthoFinder output from all 47 species
Zm00001e036599_P001 Zm00001e036599 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!