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  5. Aob_g23810

Aob_g23810 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g23810

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.04 OrthoFinder output from all 47 species
AT3G13770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67880 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07542.t1 Aspi01Gene07542 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07593.t1 ATFTSZ2-1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20357.t1 Aspi01Gene20357 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25867.t1 Aspi01Gene25867 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34803.t1 Aspi01Gene34803 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34804.t1 Aspi01Gene34804 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43278.t1 Aspi01Gene43278 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49181.t1 Aspi01Gene49181 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50511.t1 Aspi01Gene50511 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61596.t1 CRR2, Aspi01Gene61596 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67135.t1 Aspi01Gene67135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.02 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34742 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37893 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.04 OrthoFinder output from all 47 species
Ceric.11G026900.1 Ceric.11G026900 not classified & original description: pacid=50595788... 0.04 OrthoFinder output from all 47 species
Ceric.17G049800.1 Ceric.17G049800 not classified & original description: pacid=50617439... 0.03 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.26G001100.1 Ceric.26G001100 not classified & original description: pacid=50598974... 0.04 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.04 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08946 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08973 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g36368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021576001 BRCA1, ATBRCA1 DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28830.1 LOC_Os08g28830 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15459 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48712 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01983 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12402 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013956 No alias not classified & original description: CDS=1-2181 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026492 No alias not classified & original description: CDS=48-2072 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026676 No alias not classified & original description: CDS=1-2475 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0345.g027287 No alias not classified & original description: CDS=1-2001 0.02 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo462 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 720 741
IPR032867 DYW_dom 752 841
IPR033443 PPR_long 170 331
IPR002885 Pentatricopeptide_repeat 334 381
IPR002885 Pentatricopeptide_repeat 536 584
IPR002885 Pentatricopeptide_repeat 436 483
IPR002885 Pentatricopeptide_repeat 612 634
IPR002885 Pentatricopeptide_repeat 410 435
No external refs found!