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  5. Aob_g24162

Aob_g24162


Description : not classified & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g24162
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G73560 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Aop_g07275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g47200.1 LOC_Os06g47200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_118281g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Pir_g59467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19919 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082270.4.1 Solyc09g082270 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 164 251
No external refs found!