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  5. Aob_g24224

Aob_g24224


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g24224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00172440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s02193p00008230 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G01030 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004440 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111214 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07468 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05916 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26781 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05734 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23995 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015639 No alias not classified & original description: CDS=1-1713 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037007 No alias not classified & original description: CDS=105-2705 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.03 OrthoFinder output from all 47 species
Cba_g03311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.03 OrthoFinder output from all 47 species
Ceric.26G053700.1 Ceric.26G053700 not classified & original description: pacid=50599734... 0.03 OrthoFinder output from all 47 species
Ceric.27G010800.1 Ceric.27G010800 not classified & original description: pacid=50606194... 0.04 OrthoFinder output from all 47 species
Dac_g30448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08759 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008721001 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.03 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g54973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g35181 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36349 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02784 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43031 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57077 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013079 No alias not classified & original description: CDS=41-367 0.03 OrthoFinder output from all 47 species
Sam_g03800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 587 607
IPR002885 Pentatricopeptide_repeat 183 204
IPR002885 Pentatricopeptide_repeat 486 509
IPR002885 Pentatricopeptide_repeat 754 781
IPR002885 Pentatricopeptide_repeat 385 411
IPR002885 Pentatricopeptide_repeat 284 304
IPR002885 Pentatricopeptide_repeat 717 745
IPR002885 Pentatricopeptide_repeat 414 443
IPR002885 Pentatricopeptide_repeat 787 811
IPR002885 Pentatricopeptide_repeat 208 256
IPR002885 Pentatricopeptide_repeat 310 357
IPR002885 Pentatricopeptide_repeat 613 659
IPR002885 Pentatricopeptide_repeat 107 154
IPR002885 Pentatricopeptide_repeat 511 558
No external refs found!