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  5. Aob_g27297

Aob_g27297


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g27297
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Adi_g005523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23848 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36018 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g30845 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30558 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40210 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50814 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g57040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59941 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.06 OrthoFinder output from all 47 species
Cba_g07022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g73866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G016600.1 Ceric.07G016600 not classified & original description: pacid=50626137... 0.04 OrthoFinder output from all 47 species
Ceric.29G024800.1 Ceric.29G024800 not classified & original description: pacid=50625545... 0.04 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.04 OrthoFinder output from all 47 species
Ceric.31G012200.1 Ceric.31G012200 not classified & original description: pacid=50574907... 0.04 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05554 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36052 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09249 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Msp_g06933 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g23173 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27639 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g18964 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27419 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08536 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g44848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g49230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo130453 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g14308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g34663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 96 126
IPR002885 Pentatricopeptide_repeat 572 598
IPR002885 Pentatricopeptide_repeat 776 798
IPR002885 Pentatricopeptide_repeat 472 498
IPR002885 Pentatricopeptide_repeat 371 396
IPR002885 Pentatricopeptide_repeat 71 93
IPR002885 Pentatricopeptide_repeat 601 628
IPR046848 E_motif 819 872
IPR002885 Pentatricopeptide_repeat 398 443
IPR002885 Pentatricopeptide_repeat 699 747
IPR002885 Pentatricopeptide_repeat 195 241
IPR002885 Pentatricopeptide_repeat 296 343
No external refs found!