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  5. Aob_g28175

Aob_g28175


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24747 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0232.g059290 No alias not classified & original description: CDS=1-3606 0.06 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g22711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_03545 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Ore_g09943 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 255
IPR002885 Pentatricopeptide_repeat 334 358
IPR002885 Pentatricopeptide_repeat 198 220
IPR002885 Pentatricopeptide_repeat 434 458
IPR002885 Pentatricopeptide_repeat 258 306
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 359 406
No external refs found!