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  5. Aob_g28217

Aob_g28217


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28217

Target Alias Description ECC score Gene Family Method Actions
Aev_g06657 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06729 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34236 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25195 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28414 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37377.t1 Aspi01Gene37377 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036353 No alias not classified & original description: CDS=1-2463 0.02 OrthoFinder output from all 47 species
Azfi_s0219.g058621 No alias not classified & original description: CDS=1-3672 0.04 OrthoFinder output from all 47 species
Azfi_s0400.g068228 No alias not classified & original description: CDS=1-1902 0.02 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.03 OrthoFinder output from all 47 species
Dac_g13633 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39652 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
Len_g19232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g41382 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07924 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20422 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09944 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017370 No alias not classified & original description: CDS=72-2741 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021590 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2022 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0243.g026662 No alias not classified & original description: CDS=264-2522 0.03 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo182822 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Solyc04g082870.1.1 Solyc04g082870 Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 616 678
IPR002885 Pentatricopeptide_repeat 401 444
IPR002885 Pentatricopeptide_repeat 95 141
IPR002885 Pentatricopeptide_repeat 170 192
IPR002885 Pentatricopeptide_repeat 473 498
IPR002885 Pentatricopeptide_repeat 271 297
IPR002885 Pentatricopeptide_repeat 299 329
IPR002885 Pentatricopeptide_repeat 69 91
IPR002885 Pentatricopeptide_repeat 372 394
IPR002885 Pentatricopeptide_repeat 1 26
IPR002885 Pentatricopeptide_repeat 523 582
No external refs found!