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  5. Aob_g28637

Aob_g28637


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28637
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27049 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_14323 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g55840.1 LOC_Os03g55840 Pentatricopeptide repeat-containing protein DWY1,... 0.05 OrthoFinder output from all 47 species
Ore_g01992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo107700 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g25191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 15 40
IPR002885 Pentatricopeptide_repeat 116 140
IPR032867 DYW_dom 257 346
IPR046848 E_motif 160 221
IPR002885 Pentatricopeptide_repeat 42 89
No external refs found!