1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g28650

Aob_g28650


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28650
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00159410 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00218170 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00043260 No alias No description available 0.03 OrthoFinder output from all 47 species
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
AT1G63750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT3G44400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G44630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G18360 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.03 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Aob_g11382 RPP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23547 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_103789g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10427131g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432202g0030 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10432451g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433003g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433723g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433845g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10435728g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10435852g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10437230g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_162006g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_180319g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_182712g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_6801442g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_86318g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9394663g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc01g102840.3.1 Solyc01g102840 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc02g032650.3.1 Solyc02g032650 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc11g062150.3.1 Solyc11g062150 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc12g097000.2.1 Solyc12g097000 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 355 394
IPR025875 Leu-rich_rpt_4 402 441
No external refs found!