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  5. Aob_g28686

Aob_g28686


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28686
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Adi_g035683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075672 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g22784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11079 CRR21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41640 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00343.t1 Aspi01Gene00343 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02561.t1 Aspi01Gene02561 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02630.t1 CRK8, Aspi01Gene02630 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12659.t1 Aspi01Gene12659 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23581.t1 Aspi01Gene23581 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24113.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26812.t1 Aspi01Gene26812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31781.t1 Aspi01Gene31781 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34087.t1 OTP86, Aspi01Gene34087 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34104.t1 OTP84, Aspi01Gene34104 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34727.t1 Aspi01Gene34727 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34744.t1 Aspi01Gene34744 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34884.t1 Aspi01Gene34884 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34895.t1 Aspi01Gene34895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45256.t1 EMB2758, Aspi01Gene45256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45318.t1 Aspi01Gene45318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49181.t1 Aspi01Gene49181 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54997.t1 CRK8, Aspi01Gene54997 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61363.t1 Aspi01Gene61363 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65137.t1 Aspi01Gene65137 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72928.t1 Aspi01Gene72928 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06571 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19539 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.03 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.03 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.03 OrthoFinder output from all 47 species
Ceric.15G008800.1 Ceric.15G008800 not classified & original description: pacid=50639552... 0.03 OrthoFinder output from all 47 species
Ceric.16G044900.1 Ceric.16G044900 not classified & original description: pacid=50590190... 0.03 OrthoFinder output from all 47 species
Ceric.1Z110500.1 Ceric.1Z110500 not classified & original description: pacid=50639205... 0.03 OrthoFinder output from all 47 species
Ceric.22G042200.1 Ceric.22G042200 not classified & original description: pacid=50614742... 0.03 OrthoFinder output from all 47 species
Ceric.28G015300.1 Ceric.28G015300 not classified & original description: pacid=50570535... 0.03 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04371 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20970 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23588 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g28830.1 LOC_Os08g28830 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g22097 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07034 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_153011g0010 MEF1 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g03574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15459 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43377 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12402 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54364 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008324 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Sam_g06616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 84 131
IPR002885 Pentatricopeptide_repeat 590 636
IPR002885 Pentatricopeptide_repeat 286 334
IPR002885 Pentatricopeptide_repeat 388 434
IPR002885 Pentatricopeptide_repeat 185 232
IPR002885 Pentatricopeptide_repeat 490 536
IPR046848 E_motif 707 768
IPR002885 Pentatricopeptide_repeat 463 485
IPR002885 Pentatricopeptide_repeat 564 586
IPR002885 Pentatricopeptide_repeat 362 385
No external refs found!