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  5. Aob_g29716

Aob_g29716


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g29716

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00211770 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Adi_g012183 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ala_g07101 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.06 OrthoFinder output from all 47 species
Als_g17659 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04013.t1 Aspi01Gene04013 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09339.t1 RPT3, NPH3,... substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025021 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g10465 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01000130001 NPY2 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01000534001 No alias BTB/POZ domain-containing protein At1g67900... 0.05 OrthoFinder output from all 47 species
GSVIVT01002274001 DOT3 BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os09g25330.1 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g03375 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g03108 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g03158 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016653 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
Zm00001e003063_P004 NPY2, Zm00001e003063 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 243 526
No external refs found!