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  5. Aob_g30657

Aob_g30657


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30657

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
AT1G49130 No alias B-box type zinc finger protein with CCT domain 0.04 OrthoFinder output from all 47 species
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.05 OrthoFinder output from all 47 species
AT4G25990 CIL CCT motif family protein 0.02 OrthoFinder output from all 47 species
Adi_g105671 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24424 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08686 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20729 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037937 No alias CMF transcription factor & original description: CDS=1-2013 0.03 OrthoFinder output from all 47 species
Azfi_s0172.g055744 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Ceric.08G070500.1 Ceric.08G070500 BBX class-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G022400.1 Ceric.12G022400 CMF transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre15.g635100 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09127 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04816 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20875 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_02486 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
MA_10428386g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g47217 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19039 No alias BBX class-III transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452 No alias BBX class-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Zm00001e015732_P002 Zm00001e015732 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Zm00001e021820_P001 Zm00001e021820 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 20 62
IPR010402 CCT_domain 445 482
No external refs found!