1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g30840

Aob_g30840


Description : not classified & original description: none


Gene families : OG0000078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30840

Target Alias Description ECC score Gene Family Method Actions
Adi_g008795 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g014206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018023 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g020692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g029095 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g035876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g040024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g044657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g046844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049467 ORF145A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g049707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g050386 ORF145A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g070451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075964 ORF145A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078004 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g082511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106846 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g109225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g111247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114770 ORF145A not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g117991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g121820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05370 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g27927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68626 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07886.t1 Aspi01Gene07886 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11928.t1 Aspi01Gene11928 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16583.t1 ORF145A, Aspi01Gene16583 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17830.t1 Aspi01Gene17830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18037.t1 Aspi01Gene18037 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18820.t1 ORF145A, Aspi01Gene18820 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23811.t1 Aspi01Gene23811 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29875.t1 Aspi01Gene29875 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31592.t1 Aspi01Gene31592 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44109.t1 Aspi01Gene44109 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47376.t1 Aspi01Gene47376 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53512.t2 Aspi01Gene53512 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene55145.t1 ORF145A, Aspi01Gene55145 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55880.t1 ORF145A, Aspi01Gene55880 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66448.t1 ORF145A, Aspi01Gene66448 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene67591.t1 Aspi01Gene67591 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17779 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g20591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08434 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_16292 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_33206 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g05001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g39895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g40355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g13018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35744 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g40886 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20914 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g28813 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34053 ORF145A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16288 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g20185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19378 ORF145A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g19511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20425 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20790 ORF145A not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g23466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24100 ORF145A not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g24341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24483 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g24755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g00492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g32406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25605 ORF145A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g54222 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g32015 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 10 75
No external refs found!