1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g31327

Aob_g31327


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g31327
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G12030 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33568.t2 Aspi01Gene33568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.02 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28137 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10117499g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_82338g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001909 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.02 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g007580.1.1 Solyc06g007580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082980.3.1 Solyc09g082980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004776_P001 Zm00001e004776 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019073_P001 Zm00001e019073 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032942_P001 Zm00001e032942 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 87 306
No external refs found!