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  5. Aob_g31935

Aob_g31935


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g31935

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00071780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g002881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034782 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082291 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05916 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17656 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26595 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57094 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07418 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27603 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02808 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00343.t1 Aspi01Gene00343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34786.t1 Aspi01Gene34786 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45256.t1 EMB2758, Aspi01Gene45256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012008 EMB2758 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043402 No alias not classified & original description: CDS=1-2055 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.03 OrthoFinder output from all 47 species
Azfi_s0619.g079560 EMB2758 not classified & original description: CDS=1-2046 0.03 OrthoFinder output from all 47 species
Cba_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G015100.1 Ceric.04G015100 not classified & original description: pacid=50632156... 0.02 OrthoFinder output from all 47 species
Ceric.13G050400.1 Ceric.13G050400 not classified & original description: pacid=50636404... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.02 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.02 OrthoFinder output from all 47 species
Ceric.23G021700.1 Ceric.23G021700 not classified & original description: pacid=50610576... 0.03 OrthoFinder output from all 47 species
Ceric.27G010800.1 Ceric.27G010800 not classified & original description: pacid=50606194... 0.04 OrthoFinder output from all 47 species
Ceric.28G044700.1 Ceric.28G044700 not classified & original description: pacid=50570014... 0.03 OrthoFinder output from all 47 species
Ceric.30G033800.1 Ceric.30G033800 not classified & original description: pacid=50608836... 0.04 OrthoFinder output from all 47 species
Ceric.30G071100.1 Ceric.30G071100 not classified & original description: pacid=50608720... 0.03 OrthoFinder output from all 47 species
Dac_g30064 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35075 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42645 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07981 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11455 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11917 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26044 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36545 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
GSVIVT01008173001 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.04 OrthoFinder output from all 47 species
GSVIVT01028154001 No alias Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
GSVIVT01037562001 PDE247, CLB19 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.04 OrthoFinder output from all 47 species
Len_g05402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18490 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431227g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_10721g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_135075g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_17949g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_9526611g0020 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04292 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14870 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18532 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57077 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57517 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01563 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12943 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42323 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3367.g028731 No alias not classified & original description: CDS=2473-3459 0.02 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo79732 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.02 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 671 691
IPR002885 Pentatricopeptide_repeat 571 595
IPR002885 Pentatricopeptide_repeat 63 90
IPR002885 Pentatricopeptide_repeat 293 339
IPR002885 Pentatricopeptide_repeat 393 441
IPR002885 Pentatricopeptide_repeat 596 642
IPR002885 Pentatricopeptide_repeat 91 138
IPR002885 Pentatricopeptide_repeat 191 239
IPR002885 Pentatricopeptide_repeat 494 542
IPR046848 E_motif 713 758
No external refs found!