1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g36472

Aob_g36472 (COI1)


Aliases : COI1

Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g36472

Target Alias Description ECC score Gene Family Method Actions
AT2G39940 COI1 RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26810 AFB2 auxin signaling F-box 2 0.04 OrthoFinder output from all 47 species
Ala_g02207 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aob_g03539 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00665.t1 AFB2, Aspi01Gene00665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07454 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Dac_g09834 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dde_g03452 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g06397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g63420.1 COI1, LOC_Os01g63420 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Len_g15985 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
MA_10436355g0010 COI1 Coronatine-insensitive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g07144 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ore_g29827 TIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05252 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g05861 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004038 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Smo75487 AFB1, ATGRH1, GRH1 Phytohormones.jasmonic acid.perception and signal... 0.02 OrthoFinder output from all 47 species
Solyc02g079190.3.1 TIR1, Solyc02g079190 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Spa_g07433 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Zm00001e000649_P001 Zm00001e000649 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 61 100
IPR001611 Leu-rich_rpt 370 391
IPR041101 Transp_inhibit 119 165
No external refs found!