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  5. Aob_g36676

Aob_g36676


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g36676

Target Alias Description ECC score Gene Family Method Actions
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g022187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057899 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.04 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12045 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g21660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Dac_g38994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_36839 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 794 886
IPR046848 E_motif 696 757
IPR002885 Pentatricopeptide_repeat 478 526
IPR002885 Pentatricopeptide_repeat 376 423
IPR002885 Pentatricopeptide_repeat 175 221
IPR002885 Pentatricopeptide_repeat 579 626
IPR002885 Pentatricopeptide_repeat 276 323
IPR002885 Pentatricopeptide_repeat 76 106
IPR002885 Pentatricopeptide_repeat 48 73
IPR002885 Pentatricopeptide_repeat 653 677
IPR002885 Pentatricopeptide_repeat 553 578
IPR002885 Pentatricopeptide_repeat 351 374
IPR046849 Eplus_motif 763 787
No external refs found!