Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00062p00213230 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G03540 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015421 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g032567 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058262 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081792 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101228 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g15170 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g44555 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g46748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18876 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18621 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g28024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30769 | MEF21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30855 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33170 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g55221 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57869 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05266 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08381 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12045 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22148 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24428 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g26998 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27007 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16691 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23576 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene37733.t1 | Aspi01Gene37733 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene52005.t1 | Aspi01Gene52005 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71734.t1 | Aspi01Gene71734 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000440 | OTP84 | not classified & original description: CDS=1-2304 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000999 | No alias | not classified & original description: CDS=128-2962 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016204 | OTP84 | not classified & original description: CDS=27-2648 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g034904 | No alias | not classified & original description: CDS=1-1944 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0094.g043491 | No alias | not classified & original description: CDS=1-2859 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0213.g058286 | No alias | not classified & original description: CDS=1-3009 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0215.g058372 | No alias | not classified & original description: CDS=1-2739 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s2265.g110088 | No alias | not classified & original description: CDS=116-2917 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11842 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12814 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29621 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g29878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31665 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g34537 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34641 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34765 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34770 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67248 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67729 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67804 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G007000.1 | Ceric.10G007000 | not classified & original description: pacid=50613077... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G033700.1 | Ceric.36G033700 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12748 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g42982 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43504 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08946 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47669 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50838 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g01734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03922 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23570 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28218 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06035 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06075 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26542 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g15570.1 | CRR2, LOC_Os07g15570 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g15460.1 | LOC_Os12g15460 | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04829 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g14702 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28692 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g33994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g22460 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01995 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g06896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12352 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12523 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13036 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63511 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63512 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23569 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30091 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005946 | No alias | not classified & original description: CDS=1-1029 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g005690.3.1 | Solyc06g005690 | Pentatricopeptide repeat-containing protein At5g59600... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12101 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05893 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05928 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06527 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21869 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g22908 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g41078 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005874 | microtubule | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019799 | tubulin N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071929 | alpha-tubulin acetylation | IEP | HCCA |
| CC | GO:0099080 | supramolecular complex | IEP | HCCA |
| CC | GO:0099081 | supramolecular polymer | IEP | HCCA |
| CC | GO:0099512 | supramolecular fiber | IEP | HCCA |
| CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 552 | 574 |
| IPR002885 | Pentatricopeptide_repeat | 349 | 373 |
| IPR002885 | Pentatricopeptide_repeat | 48 | 68 |
| IPR046848 | E_motif | 596 | 657 |
| IPR002885 | Pentatricopeptide_repeat | 74 | 120 |
| IPR002885 | Pentatricopeptide_repeat | 174 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 275 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 377 | 423 |
| IPR002885 | Pentatricopeptide_repeat | 477 | 526 |
| No external refs found! |
