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  5. Aob_g36806

Aob_g36806


Description : not classified & original description: none


Gene families : OG0000520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g36806
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00233360 evm_27.TU.AmTr_v1... 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00134830 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G12090 ELP extensin-like protein 0.03 OrthoFinder output from all 47 species
AT1G12100 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT4G12520 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g40925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G081100.1 Ceric.22G081100 not classified & original description: pacid=50615395... 0.03 OrthoFinder output from all 47 species
Ehy_g06559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08023 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001298001 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
LOC_Os06g07220.1 LOC_Os06g07220 36.4 kDa proline-rich protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
MA_214375g0010 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc03g090990.1.1 Solyc03g090990 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g091010.1.1 Solyc03g091010 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g091030.1.1 Solyc03g091030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g091035.1.1 Solyc03g091035 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g093050.1.1 Solyc03g093050 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g093060.1.1 Solyc03g093060 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g005960.2.1 Solyc08g005960 Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e037484_P001 Zm00001e037484 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 91 172
No external refs found!