Aob_g37107


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g37107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058786 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076457 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23929 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03252 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t2 OSB3, Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34087.t1 OTP86, Aspi01Gene34087 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043298 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=1-1062 0.03 OrthoFinder output from all 47 species
Cba_g03367 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04659 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06497 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75809 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G042100.1 EMB2758, Ceric.11G042100 not classified & original description: pacid=50596851... 0.03 OrthoFinder output from all 47 species
Dac_g08335 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07891 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06198 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07807 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10515 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25612 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g26299 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33317 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g06422 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g15026 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29276 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24068 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63503 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63651 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03469 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03722 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15493 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30309 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03628 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011566 No alias not classified & original description: CDS=1-2082 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012770 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015944 CRR22 not classified & original description: CDS=122-4345 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021689 No alias S-adenosyl methionine transporter *(GOSAMT) & original... 0.03 OrthoFinder output from all 47 species
Sam_g02113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo131170 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.03 OrthoFinder output from all 47 species
Solyc12g042400.1.1 SLO1, Solyc12g042400 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06463 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19925 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20369 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44315 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040924_P001 Zm00001e040924 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004535 poly(A)-specific ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 380 425
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 175 223
IPR002885 Pentatricopeptide_repeat 452 474
IPR002885 Pentatricopeptide_repeat 352 372
No external refs found!