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  5. Aob_g37108

Aob_g37108


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g37108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AT3G13770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034320 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036768 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g039747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053631 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06729 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17019 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09002 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26957 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34532.t1 Aspi01Gene34532 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38374.t1 Aspi01Gene38374 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012535 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g013040 No alias not classified & original description: CDS=1-1689 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029802 No alias not classified & original description: CDS=1-2208 0.03 OrthoFinder output from all 47 species
Azfi_s0047.g030252 No alias not classified & original description: CDS=1-2775 0.05 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Azfi_s0118.g046610 OTP86 not classified & original description: CDS=1-2490 0.03 OrthoFinder output from all 47 species
Azfi_s0471.g072918 No alias not classified & original description: CDS=1-3447 0.04 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G022800.1 Ceric.06G022800 not classified & original description: pacid=50620328... 0.02 OrthoFinder output from all 47 species
Ceric.11G026900.1 Ceric.11G026900 not classified & original description: pacid=50595788... 0.03 OrthoFinder output from all 47 species
Ceric.13G010300.1 Ceric.13G010300 not classified & original description: pacid=50636329... 0.03 OrthoFinder output from all 47 species
Ceric.25G070000.1 VAC1, ECB2,... not classified & original description: pacid=50593626... 0.03 OrthoFinder output from all 47 species
Ceric.30G023200.1 Ceric.30G023200 not classified & original description: pacid=50609019... 0.03 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12454 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15109 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30064 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38506 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06366 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44643 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25598 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25754 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01009227001 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_36178 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_40766 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08566 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58477 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07802 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_17949g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
MA_75133g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_8678g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_9415113g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12189 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15248 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02784 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43620 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57727 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01563 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g002023 No alias not classified & original description: CDS=1-2592 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004867 No alias not classified & original description: CDS=342-1943 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018498 No alias not classified & original description: CDS=87-2291 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019544 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=30-812 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 716 751
IPR002885 Pentatricopeptide_repeat 362 392
IPR002885 Pentatricopeptide_repeat 674 698
IPR002885 Pentatricopeptide_repeat 68 90
IPR002885 Pentatricopeptide_repeat 573 598
IPR002885 Pentatricopeptide_repeat 397 443
IPR002885 Pentatricopeptide_repeat 93 139
IPR002885 Pentatricopeptide_repeat 295 343
IPR002885 Pentatricopeptide_repeat 498 546
IPR002885 Pentatricopeptide_repeat 599 645
IPR002885 Pentatricopeptide_repeat 194 241
IPR002885 Pentatricopeptide_repeat 161 192
No external refs found!