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  5. Aob_g37337

Aob_g37337


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g37337

Target Alias Description ECC score Gene Family Method Actions
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G09950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26781 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49181.t1 Aspi01Gene49181 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0934.g093088 No alias not classified & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Cba_g03311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.03 OrthoFinder output from all 47 species
Ceric.11G081200.1 Ceric.11G081200 not classified & original description: pacid=50594979... 0.03 OrthoFinder output from all 47 species
Ceric.12G084700.1 Ceric.12G084700 not classified & original description: pacid=50602071... 0.02 OrthoFinder output from all 47 species
Ceric.25G042100.1 Ceric.25G042100 not classified & original description: pacid=50593153... 0.03 OrthoFinder output from all 47 species
Ceric.26G043600.1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G052000.1 OTP86, Ceric.28G052000 not classified & original description: pacid=50569960... 0.03 OrthoFinder output from all 47 species
Ceric.36G001100.1 Ceric.36G001100 not classified & original description: pacid=50568746... 0.03 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03759 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17198 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01031849001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
GSVIVT01035618001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Len_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06601 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01983 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13510 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06373 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo101239 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Smo131170 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo79732 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Tin_g31404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 798 860
IPR002885 Pentatricopeptide_repeat 478 527
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 581 626
IPR002885 Pentatricopeptide_repeat 378 424
IPR002885 Pentatricopeptide_repeat 277 323
IPR002885 Pentatricopeptide_repeat 683 713
IPR002885 Pentatricopeptide_repeat 49 76
IPR002885 Pentatricopeptide_repeat 453 475
IPR002885 Pentatricopeptide_repeat 719 741
IPR002885 Pentatricopeptide_repeat 250 275
IPR002885 Pentatricopeptide_repeat 554 574
IPR002885 Pentatricopeptide_repeat 150 172
IPR002885 Pentatricopeptide_repeat 352 376
IPR002885 Pentatricopeptide_repeat 755 779
IPR002885 Pentatricopeptide_repeat 655 678
IPR002885 Pentatricopeptide_repeat 77 107
No external refs found!