1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g37976

Aob_g37976 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g37976
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT1G25250 IDD16, AtIDD16 indeterminate(ID)-domain 16 0.02 OrthoFinder output from all 47 species
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.02 OrthoFinder output from all 47 species
AT5G44160 NUC C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
Adi_g021881 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g079392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13557 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22280 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63551.t1 MGP, Aspi01Gene63551 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G030600.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05725 IDD11, AtIDD11 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g24855 No alias component *(MED19) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ehy_g29791 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010283001 IDD5, AtIDD5 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01016867001 AtIDD7, IDD7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01031112001 IDD2, AtIDD2 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_17209 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Gb_35984 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g15551 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g28092 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023894 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo9109 IDD14, AtIDD14 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc02g062940.3.1 Solyc02g062940 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g074780.3.1 NUC, Solyc09g074780 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g10394 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g39904 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000780_P001 Zm00001e000780 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e003968_P002 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e025973_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e026143_P001 MGP, Zm00001e026143 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e034317_P001 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 163 185
No external refs found!