Aob_g40241


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g40241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Adi_g052188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07409 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27898 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.04 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.05 OrthoFinder output from all 47 species
Ceric.10G047400.1 OTP84, Ceric.10G047400 not classified & original description: pacid=50612794... 0.05 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Dcu_g07622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018098001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
GSVIVT01018597001 No alias RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
GSVIVT01023860001 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01033304001 CRR28 Pentatricopeptide repeat-containing protein At2g02980,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
LOC_Os06g02200.1 CRR22, LOC_Os06g02200 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Len_g03278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18913 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18960 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07429 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20334 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30107 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo81196 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Smo84339 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 659 705
IPR002885 Pentatricopeptide_repeat 557 604
IPR002885 Pentatricopeptide_repeat 356 404
IPR002885 Pentatricopeptide_repeat 456 503
IPR002885 Pentatricopeptide_repeat 153 202
IPR002885 Pentatricopeptide_repeat 733 757
IPR002885 Pentatricopeptide_repeat 229 255
IPR002885 Pentatricopeptide_repeat 257 287
IPR046848 E_motif 776 837
No external refs found!