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  5. Aob_g42493

Aob_g42493 (TRXH2, TRX2, ATH2,...)


Aliases : TRXH2, TRX2, ATH2, ATTRXH2, ATTRX2

Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g42493
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Adi_g022561 ATH9, TH9, TRX H9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41084 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17941 TRXH2, TRX2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47348 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66550 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05540 TRXH2, TRX2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25121 ACHT5 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 63 157
No external refs found!