Aob_g42816 (ERF-1, ATERF-1)

Aliases : ERF-1, ATERF-1

Description : subgroup ERF-IX transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g42816

Target	Alias	Description	ECC score	Gene Family Method
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g013119	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Adi_g044380	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.05	OrthoFinder output from all 47 species
Als_g54778	DEAR2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g58270	DEAR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g14409	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene23658.t1	HRE2, Aspi01Gene23658	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ceric.33G045200.1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.05	OrthoFinder output from all 47 species
Dcu_g28574	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g32012	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001089001	Rap2.6L	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01032983001	Rap2.6L	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Gb_08541	No alias	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Gb_11856	HRE2	Ethylene-responsive transcription factor RAP2-3...	0.04	OrthoFinder output from all 47 species
LOC_Os01g58420.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g49700.1	LOC_Os05g49700	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Lfl_g04058	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g30075	CRF3	subgroup ERF-VI transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Mp6g04880.1	DREB26	Ethylene-responsive transcription factor ERF008...	0.02	OrthoFinder output from all 47 species
Mp6g08690.1	TINY2	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Mp7g13760.1	RAP2.4	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Ore_g31608	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g10528	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13205	No alias	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g33570	TMO3, CRF2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g34102	ORA47	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g15405	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023700	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc01g090560.4.1	Solyc01g090560	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Solyc05g013540.1.1	DRN-LIKE, ESR2,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc05g051180.3.1	ERF1, ATERF1,...	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Zm00001e015219_P001	Zm00001e015219	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e019026_P001	CRF3, Zm00001e019026	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e023149_P001	ERF5, ATERF-5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e023870_P001	RAP2.4, Zm00001e023870	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e032483_P001	Zm00001e032483	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e034242_P001	RAP2.12, Zm00001e034242	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e041532_P001	Zm00001e041532	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004126	cytidine deaminase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006216	cytidine catabolic process	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009119	ribonucleoside metabolic process	IEP	HCCA
BP	GO:0009164	nucleoside catabolic process	IEP	HCCA
BP	GO:0009972	cytidine deamination	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	HCCA
BP	GO:0042454	ribonucleoside catabolic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046087	cytidine metabolic process	IEP	HCCA
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	HCCA
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	HCCA
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901658	glycosyl compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	292	342

External Links

No external refs found!

Aob_g42816 (ERF-1, ATERF-1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation